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Citation

If scTenifoldpy is useful for your research, please cite both the software and the underlying methods.

Software

Machine-readable metadata lives in CITATION.cff at the repository root; GitHub renders a "Cite this repository" button from it.

Methods

scTenifoldNet — Osorio D, Zhong Y, Li G, Huang JZ, Cai JJ. scTenifoldNet: A Machine Learning Workflow for Constructing and Comparing Transcriptome-wide Gene Regulatory Networks from Single-Cell Data. Patterns, 2020.

scTenifoldKnk — Osorio D, Zhong Y, Li G, Xu Q, Yang Y, Tian Y, Chapkin RS, Huang JZ, Cai JJ. scTenifoldKnk: an efficient virtual knockout tool for gene function predictions via single-cell gene regulatory network perturbation. Patterns, 2022.